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nasreddin nasreddin - have a hobby to understand myself Gene map 乳腺癌

乳腺癌基因

中華8芯片是如何測試乳腺癌基因的,檢測哪些SNP? 又看到其他家乳腺癌基因去檢測"基因FGFR2 + 基因CASC16 + 基因6q25.1"
從demo賬戶中看到只有"男性乳腺癌"一項(xiàng),另外男女不同性別的解讀項(xiàng)目是不是有些區(qū)別?
2015-02-09 ? IP屬地上海
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4 個(gè)回復(fù)

zhengqiang - 勤奮學(xué)習(xí)
對(duì),男性女性的項(xiàng)目有一些差異,你可以改demo的個(gè)人設(shè)置是女性,然后刷新數(shù)據(jù)就能看到一些女性項(xiàng)目。
中華8芯片覆蓋乳腺癌相關(guān)的snp位置不多,估計(jì)有2-30個(gè)snp。
其他家的描述應(yīng)該還是snp本身,就是檢查某個(gè)基因上的snp,而不是基因全長檢查?;蛉L檢查就是檢查相關(guān)基因上的所有位點(diǎn)信息,而不是特定的snp,這種檢查目前的價(jià)格應(yīng)該在3-5k左右。
費(fèi)力科思 - WeGene勤雜工
但是,現(xiàn)在看上去,BRCA基因在中國人群里的突變情況跟在白種人群里面的突變情況還是有明顯差異的。
轉(zhuǎn)自?http://www.snpedia.com/index.php/BRCA1
?
BRCA1?is a human tumor suppressor gene. Like most genes, variations in the?BRCA1?gene can be either causal for a given disease, or associated with somewhat higher risk, or benign.

However, "causal" does?not?mean that there is a 100% certainty that a person with such a variant will develop the disease. For individuals with causal?BRCA1?variations, a good clinical summary provided by OMIM states the disease odds as[1]:

Mutation carriers have an increased risk of developing breast and/or ovarian cancer at an earlier age
Lifetime risk of breast cancer in mutation carriers is 80 to 90%
Lifetime risk of ovarian cancer in mutation carriers is 40 to 50%
Increased risk of bilateral breast cancer


There are over 500?BRCA1?variants that are considered causal, but almost all are very rare. It is estimated that all causal BRCA mutations combined occur in less than 1/3rd of 1% of people. Some of "slightly less rare" causal BRCA1 SNPs include:

185delAG BRCA1?i4000377?(II is normal; DD or DI are the mutations); dbSNP?rs80357713?is probably the best representative; this is most prevalent in?Ashkenazi Jews
5382insC BRCA1?i4000378?(DD is normal; II or DI are the mutations);?rs76171189?or?rs80357906?in dbSNP; also most prevalent in?Ashkenazi Jews


Other causal?BRCA1?mutations include:

rs28897696, known as A1708E, predicted to be highly linked & causative
rs55770810, known as R1699W, predicted to be linked & causative
flyboyleo - wegene票友
所以我們芯片里沒有BRCA1 和BRCA2的點(diǎn)?還是只有男性沒有?。。。

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